Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox3P53784 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.96□□□□□ -0.49
Sox3P53784 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sox3P53784 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Sox3P53784 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox3P53784 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox3P53784 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.96□□□□□ -0.49
Sox3P53784 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.96□□□□□ -0.49
Sox3P53784 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox3P53784 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.96□□□□□ -0.49
Sox3P53784 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox3P53784 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox3P53784 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox3P53784 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
Sox3P53784 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox3P53784 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Sox3P53784 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox3P53784 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox3P53784 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox3P53784 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.96□□□□□ -0.5
Sox3P53784 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox3P53784 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox3P53784 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox3P53784 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.95□□□□□ -0.5
Sox3P53784 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox3P53784 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Sox3P53784 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sox3P53784 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox3P53784 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Sox3P53784 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Snord83b-201ENSMUST00000104546 94 ntBASIC11.95□□□□□ -0.5
Sox3P53784 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.95□□□□□ -0.5
Sox3P53784 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Sox3P53784 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox3P53784 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Sox3P53784 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox3P53784 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox3P53784 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox3P53784 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.95□□□□□ -0.5
Sox3P53784 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.94□□□□□ -0.5
Sox3P53784 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Sox3P53784 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox3P53784 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox3P53784 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.94□□□□□ -0.5
Sox3P53784 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms