Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.34■□□□□ 0.21
GRIK1P39086 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 AL596257.1-201ENST00000641463 2694 ntBASIC16.34■□□□□ 0.21
GRIK1P39086 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GRIK1P39086 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.34■□□□□ 0.21
GRIK1P39086 AC009090.5-201ENST00000624886 2285 ntBASIC16.34■□□□□ 0.21
GRIK1P39086 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
GRIK1P39086 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GRIK1P39086 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.34■□□□□ 0.21
GRIK1P39086 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.34■□□□□ 0.21
GRIK1P39086 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.34■□□□□ 0.21
GRIK1P39086 KRT43P-201ENST00000434019 910 ntBASIC16.34■□□□□ 0.21
GRIK1P39086 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.34■□□□□ 0.21
GRIK1P39086 AC234783.1-201ENST00000441761 496 ntBASIC16.34■□□□□ 0.21
GRIK1P39086 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
GRIK1P39086 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.34■□□□□ 0.21
GRIK1P39086 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.34■□□□□ 0.21
GRIK1P39086 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.34■□□□□ 0.21
GRIK1P39086 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 AL359881.2-201ENST00000602973 570 ntBASIC16.34■□□□□ 0.21
GRIK1P39086 AL512343.1-201ENST00000605837 169 ntBASIC16.34■□□□□ 0.21
GRIK1P39086 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.34■□□□□ 0.21
GRIK1P39086 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GRIK1P39086 AC022188.1-201ENST00000620960 1664 ntBASIC16.34■□□□□ 0.21
GRIK1P39086 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
GRIK1P39086 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
GRIK1P39086 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.33■□□□□ 0.21
GRIK1P39086 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.33■□□□□ 0.21
GRIK1P39086 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
GRIK1P39086 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
GRIK1P39086 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 BAATP1-201ENST00000412284 1225 ntBASIC16.33■□□□□ 0.2
GRIK1P39086 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.33■□□□□ 0.2
GRIK1P39086 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.33■□□□□ 0.2
GRIK1P39086 BCRP2-202ENST00000447763 634 ntBASIC16.33■□□□□ 0.2
GRIK1P39086 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.33■□□□□ 0.2
GRIK1P39086 CROCCP4-201ENST00000457096 498 ntBASIC16.33■□□□□ 0.2
GRIK1P39086 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 BCRP6-201ENST00000510112 632 ntBASIC16.33■□□□□ 0.2
GRIK1P39086 BCRP7-201ENST00000511549 544 ntBASIC16.33■□□□□ 0.2
GRIK1P39086 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.33■□□□□ 0.2
GRIK1P39086 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.33■□□□□ 0.2
GRIK1P39086 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.33■□□□□ 0.2
GRIK1P39086 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.33■□□□□ 0.2
GRIK1P39086 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.33■□□□□ 0.2
GRIK1P39086 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.33■□□□□ 0.2
GRIK1P39086 AL022328.1-201ENST00000610050 478 ntBASIC16.33■□□□□ 0.2
GRIK1P39086 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.33■□□□□ 0.2
GRIK1P39086 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 AC134312.5-201ENST00000568031 1313 ntBASIC16.33■□□□□ 0.2
GRIK1P39086 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.33■□□□□ 0.2
GRIK1P39086 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.33■□□□□ 0.2
GRIK1P39086 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.33■□□□□ 0.2
GRIK1P39086 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.33■□□□□ 0.2
GRIK1P39086 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.33■□□□□ 0.2
GRIK1P39086 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GRIK1P39086 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIK1P39086 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.33■□□□□ 0.2
GRIK1P39086 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIK1P39086 CICP6-201ENST00000457191 2729 ntBASIC16.32■□□□□ 0.2
GRIK1P39086 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIK1P39086 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.32■□□□□ 0.2
GRIK1P39086 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms