Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 CYP4F23P-201ENST00000593402 1579 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 AC006449.5-201ENST00000610658 2098 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.15■□□□□ 0.5
COL4A5P29400 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.15■□□□□ 0.5
COL4A5P29400 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
COL4A5P29400 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COL4A5P29400 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COL4A5P29400 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
COL4A5P29400 AP000356.3-201ENST00000382243 753 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 AP002803.1-201ENST00000528836 498 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 AC141586.1-203ENST00000567242 366 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.15■□□□□ 0.5
COL4A5P29400 AL603832.2-201ENST00000566195 2125 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL4A5P29400 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.14■□□□□ 0.5
COL4A5P29400 AC020916.1-201ENST00000587762 1774 ntBASIC18.14■□□□□ 0.49
COL4A5P29400 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.14■□□□□ 0.49
COL4A5P29400 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A5P29400 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A5P29400 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A5P29400 RPL18AP3-201ENST00000462885 528 ntBASIC18.14■□□□□ 0.49
COL4A5P29400 RN7SL258P-201ENST00000478664 300 ntBASIC18.14■□□□□ 0.49
COL4A5P29400 RN7SL818P-201ENST00000485099 259 ntBASIC18.14■□□□□ 0.49
COL4A5P29400 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.14■□□□□ 0.49
COL4A5P29400 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A5P29400 RN7SL725P-201ENST00000606439 259 ntBASIC18.14■□□□□ 0.49
COL4A5P29400 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.14■□□□□ 0.49
COL4A5P29400 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.14■□□□□ 0.49
COL4A5P29400 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL4A5P29400 AC025271.4-201ENST00000621477 1726 ntBASIC18.14■□□□□ 0.49
COL4A5P29400 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A5P29400 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
COL4A5P29400 AL139384.1-201ENST00000612143 3047 ntBASIC18.14■□□□□ 0.49
COL4A5P29400 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.14■□□□□ 0.49
COL4A5P29400 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A5P29400 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL4A5P29400 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.13■□□□□ 0.49
COL4A5P29400 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 AC234644.1-201ENST00000406065 370 ntBASIC18.13■□□□□ 0.49
COL4A5P29400 FAM58BP-201ENST00000439056 645 ntBASIC18.13■□□□□ 0.49
COL4A5P29400 AL645933.1-201ENST00000440087 609 ntBASIC18.13■□□□□ 0.49
COL4A5P29400 AC006122.1-201ENST00000493323 440 ntBASIC18.13■□□□□ 0.49
COL4A5P29400 AC026410.1-201ENST00000507366 1101 ntBASIC18.13■□□□□ 0.49
COL4A5P29400 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL4A5P29400 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A5P29400 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.13■□□□□ 0.49
COL4A5P29400 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.13■□□□□ 0.49
COL4A5P29400 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A5P29400 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A5P29400 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.13■□□□□ 0.49
COL4A5P29400 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL4A5P29400 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A5P29400 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COL4A5P29400 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.12■□□□□ 0.49
COL4A5P29400 AC005632.3-201ENST00000605544 308 ntBASIC18.12■□□□□ 0.49
COL4A5P29400 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.12■□□□□ 0.49
COL4A5P29400 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.12■□□□□ 0.49
COL4A5P29400 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A5P29400 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL4A5P29400 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.12■□□□□ 0.49
COL4A5P29400 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
COL4A5P29400 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A5P29400 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A5P29400 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A5P29400 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.12■□□□□ 0.49
COL4A5P29400 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL4A5P29400 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A5P29400 LINC01165-201ENST00000445190 1623 ntBASIC18.12■□□□□ 0.49
COL4A5P29400 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.12■□□□□ 0.49
COL4A5P29400 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.12■□□□□ 0.49
COL4A5P29400 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A5P29400 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A5P29400 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.12■□□□□ 0.49
COL4A5P29400 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.12■□□□□ 0.49
COL4A5P29400 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms