Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RXRBP28702 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
RXRBP28702 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RXRBP28702 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 CCL25-202ENST00000315626 450 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC19.78■□□□□ 0.76
RXRBP28702 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 CYP4F36P-201ENST00000589193 186 ntBASIC19.78■□□□□ 0.76
RXRBP28702 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC19.78■□□□□ 0.76
RXRBP28702 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.78■□□□□ 0.76
RXRBP28702 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RXRBP28702 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRBP28702 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRBP28702 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.77■□□□□ 0.76
RXRBP28702 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRBP28702 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRBP28702 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RXRBP28702 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RXRBP28702 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.77■□□□□ 0.76
RXRBP28702 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RXRBP28702 IGKV1OR-2-201ENST00000457995 350 ntBASIC19.77■□□□□ 0.76
RXRBP28702 AC026434.2-201ENST00000506094 1078 ntBASIC19.77■□□□□ 0.76
RXRBP28702 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.77■□□□□ 0.76
RXRBP28702 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RXRBP28702 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC19.77■□□□□ 0.76
RXRBP28702 AC138701.2-201ENST00000553634 226 ntBASIC19.77■□□□□ 0.76
RXRBP28702 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19.77■□□□□ 0.76
RXRBP28702 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC19.77■□□□□ 0.76
RXRBP28702 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC19.77■□□□□ 0.76
RXRBP28702 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.77■□□□□ 0.76
RXRBP28702 AC110057.1-201ENST00000636031 898 ntBASIC19.77■□□□□ 0.76
RXRBP28702 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.77■□□□□ 0.76
RXRBP28702 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RXRBP28702 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRBP28702 AC006058.4-201ENST00000624016 1670 ntBASIC19.77■□□□□ 0.76
RXRBP28702 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.77■□□□□ 0.75
RXRBP28702 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RXRBP28702 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.77■□□□□ 0.75
RXRBP28702 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 PHB-210ENST00000511832 1509 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RXRBP28702 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.76■□□□□ 0.75
RXRBP28702 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RXRBP28702 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RXRBP28702 AC008764.6-201ENST00000595909 2069 ntBASIC19.76■□□□□ 0.75
RXRBP28702 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RXRBP28702 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.76■□□□□ 0.75
RXRBP28702 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.76■□□□□ 0.75
RXRBP28702 TREHP1-201ENST00000531328 465 ntBASIC19.76■□□□□ 0.75
RXRBP28702 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.76■□□□□ 0.75
RXRBP28702 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 AC007952.4-201ENST00000573866 637 ntBASIC19.76■□□□□ 0.75
RXRBP28702 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RXRBP28702 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
RXRBP28702 MARK2P16-201ENST00000605714 1723 ntBASIC19.76■□□□□ 0.75
RXRBP28702 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.76■□□□□ 0.75
RXRBP28702 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRBP28702 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RXRBP28702 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RXRBP28702 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RXRBP28702 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RXRBP28702 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRBP28702 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RXRBP28702 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRBP28702 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RXRBP28702 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RXRBP28702 AC092580.1-201ENST00000433998 658 ntBASIC19.75■□□□□ 0.75
RXRBP28702 VENTXP4-201ENST00000449029 958 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms