Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC136621.1-201ENST00000624017 2304 ntBASIC18.39■□□□□ 0.53
COL1A1P02452 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.39■□□□□ 0.53
COL1A1P02452 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COL1A1P02452 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL1A1P02452 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL1A1P02452 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COL1A1P02452 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
COL1A1P02452 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL1A1P02452 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL1A1P02452 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL1A1P02452 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL1A1P02452 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.39■□□□□ 0.53
COL1A1P02452 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.39■□□□□ 0.53
COL1A1P02452 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.39■□□□□ 0.53
COL1A1P02452 COX5BP1-201ENST00000507622 393 ntBASIC18.39■□□□□ 0.53
COL1A1P02452 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.39■□□□□ 0.53
COL1A1P02452 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL1A1P02452 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
COL1A1P02452 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COL1A1P02452 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL1A1P02452 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.38■□□□□ 0.53
COL1A1P02452 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.38■□□□□ 0.53
COL1A1P02452 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.38■□□□□ 0.53
COL1A1P02452 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.38■□□□□ 0.53
COL1A1P02452 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.38■□□□□ 0.53
COL1A1P02452 MIR3619-201ENST00000579667 83 ntBASIC18.38■□□□□ 0.53
COL1A1P02452 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.38■□□□□ 0.53
COL1A1P02452 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.38■□□□□ 0.53
COL1A1P02452 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.38■□□□□ 0.53
COL1A1P02452 AC138627.1-207ENST00000641560 1006 ntBASIC18.38■□□□□ 0.53
COL1A1P02452 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.38■□□□□ 0.53
COL1A1P02452 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL1A1P02452 AP000845.1-201ENST00000581677 2131 ntBASIC18.38■□□□□ 0.53
COL1A1P02452 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.38■□□□□ 0.53
COL1A1P02452 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.37■□□□□ 0.53
COL1A1P02452 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COL1A1P02452 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.37■□□□□ 0.53
COL1A1P02452 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COL1A1P02452 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COL1A1P02452 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.37■□□□□ 0.53
COL1A1P02452 AC005077.2-201ENST00000449786 690 ntBASIC18.37■□□□□ 0.53
COL1A1P02452 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.37■□□□□ 0.53
COL1A1P02452 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.37■□□□□ 0.53
COL1A1P02452 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.37■□□□□ 0.53
COL1A1P02452 AC005730.2-201ENST00000564549 1184 ntBASIC18.37■□□□□ 0.53
COL1A1P02452 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.37■□□□□ 0.53
COL1A1P02452 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.37■□□□□ 0.53
COL1A1P02452 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COL1A1P02452 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.37■□□□□ 0.53
COL1A1P02452 AL137783.1-201ENST00000623494 1896 ntBASIC18.37■□□□□ 0.53
COL1A1P02452 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL1A1P02452 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.37■□□□□ 0.53
COL1A1P02452 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.37■□□□□ 0.53
COL1A1P02452 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms