Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.7■□□□□ 0.74
KCNQ3O43525 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.7■□□□□ 0.74
KCNQ3O43525 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.7■□□□□ 0.74
KCNQ3O43525 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNQ3O43525 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNQ3O43525 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNQ3O43525 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNQ3O43525 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNQ3O43525 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNQ3O43525 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNQ3O43525 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
KCNQ3O43525 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.69■□□□□ 0.74
KCNQ3O43525 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
KCNQ3O43525 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNQ3O43525 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNQ3O43525 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
KCNQ3O43525 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
KCNQ3O43525 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KCNQ3O43525 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNQ3O43525 MTX1P1-201ENST00000440904 838 ntBASIC19.69■□□□□ 0.74
KCNQ3O43525 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
KCNQ3O43525 EEF1DP1-201ENST00000585891 896 ntBASIC19.69■□□□□ 0.74
KCNQ3O43525 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNQ3O43525 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.69■□□□□ 0.74
KCNQ3O43525 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.69■□□□□ 0.74
KCNQ3O43525 AC073413.1-201ENST00000603927 732 ntBASIC19.69■□□□□ 0.74
KCNQ3O43525 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 AL008638.5-201ENST00000623814 1298 ntBASIC19.69■□□□□ 0.74
KCNQ3O43525 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNQ3O43525 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.69■□□□□ 0.74
KCNQ3O43525 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
KCNQ3O43525 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNQ3O43525 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.68■□□□□ 0.74
KCNQ3O43525 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNQ3O43525 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 AC055811.4-201ENST00000624039 1754 ntBASIC19.68■□□□□ 0.74
KCNQ3O43525 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 AC015818.8-201ENST00000587907 1519 ntBASIC19.68■□□□□ 0.74
KCNQ3O43525 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.68■□□□□ 0.74
KCNQ3O43525 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KCNQ3O43525 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNQ3O43525 BCYRN1-201ENST00000418539 200 ntBASIC19.68■□□□□ 0.74
KCNQ3O43525 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.68■□□□□ 0.74
KCNQ3O43525 AC245100.3-201ENST00000441281 285 ntBASIC19.68■□□□□ 0.74
KCNQ3O43525 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.68■□□□□ 0.74
KCNQ3O43525 AC026434.2-201ENST00000506094 1078 ntBASIC19.68■□□□□ 0.74
KCNQ3O43525 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.68■□□□□ 0.74
KCNQ3O43525 AC104982.3-201ENST00000581995 514 ntBASIC19.68■□□□□ 0.74
KCNQ3O43525 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.68■□□□□ 0.74
KCNQ3O43525 AL139099.5-201ENST00000635274 300 ntBASIC19.68■□□□□ 0.74
KCNQ3O43525 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
KCNQ3O43525 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KCNQ3O43525 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 CLUHP2-201ENST00000426660 1303 ntBASIC19.68■□□□□ 0.74
KCNQ3O43525 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KCNQ3O43525 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNQ3O43525 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KCNQ3O43525 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNQ3O43525 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KCNQ3O43525 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNQ3O43525 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KCNQ3O43525 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KCNQ3O43525 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
KCNQ3O43525 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCNQ3O43525 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KCNQ3O43525 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.67■□□□□ 0.74
KCNQ3O43525 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KCNQ3O43525 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.67■□□□□ 0.74
KCNQ3O43525 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KCNQ3O43525 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.67■□□□□ 0.74
KCNQ3O43525 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms