Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn6Q9Z262 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Cldn6Q9Z262 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn6Q9Z262 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn6Q9Z262 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn6Q9Z262 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Cldn6Q9Z262 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn6Q9Z262 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn6Q9Z262 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn6Q9Z262 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn6Q9Z262 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn6Q9Z262 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn6Q9Z262 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Cldn6Q9Z262 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn6Q9Z262 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn6Q9Z262 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn6Q9Z262 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.58■□□□□ 0.72
Cldn6Q9Z262 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cldn6Q9Z262 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
Cldn6Q9Z262 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn6Q9Z262 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.58■□□□□ 0.72
Cldn6Q9Z262 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Cldn6Q9Z262 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn6Q9Z262 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn6Q9Z262 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn6Q9Z262 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cldn6Q9Z262 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn6Q9Z262 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn6Q9Z262 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn6Q9Z262 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn6Q9Z262 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn6Q9Z262 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cldn6Q9Z262 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn6Q9Z262 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn6Q9Z262 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cldn6Q9Z262 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.55■□□□□ 0.72
Cldn6Q9Z262 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn6Q9Z262 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn6Q9Z262 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn6Q9Z262 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn6Q9Z262 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn6Q9Z262 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn6Q9Z262 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cldn6Q9Z262 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn6Q9Z262 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cldn6Q9Z262 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.52■□□□□ 0.72
Cldn6Q9Z262 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.52■□□□□ 0.72
Cldn6Q9Z262 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cldn6Q9Z262 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cldn6Q9Z262 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.51■□□□□ 0.71
Cldn6Q9Z262 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cldn6Q9Z262 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn6Q9Z262 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn6Q9Z262 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn6Q9Z262 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn6Q9Z262 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn6Q9Z262 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn6Q9Z262 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn6Q9Z262 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms