Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20AQ9NP66 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 SLC25A24-204ENST00000569674 2357 ntBASIC20.93■□□□□ 0.94
HMG20AQ9NP66 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 AC008813.1-201ENST00000536597 885 ntBASIC20.93■□□□□ 0.94
HMG20AQ9NP66 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 AC127496.7-201ENST00000625110 1798 ntBASIC20.92■□□□□ 0.94
HMG20AQ9NP66 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20AQ9NP66 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
HMG20AQ9NP66 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20AQ9NP66 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20AQ9NP66 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 ABHD17AP4-201ENST00000411545 909 ntBASIC20.87■□□□□ 0.93
HMG20AQ9NP66 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 LINC00526-201ENST00000581067 1875 ntBASIC20.87■□□□□ 0.93
HMG20AQ9NP66 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms