Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20AQ9NP66 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20AQ9NP66 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 SLC25A24-204ENST00000569674 2357 ntBASIC20.93■□□□□ 0.94
HMG20AQ9NP66 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 AC008813.1-201ENST00000536597 885 ntBASIC20.93■□□□□ 0.94
HMG20AQ9NP66 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20AQ9NP66 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 AC127496.7-201ENST00000625110 1798 ntBASIC20.92■□□□□ 0.94
HMG20AQ9NP66 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20AQ9NP66 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.91■□□□□ 0.94
HMG20AQ9NP66 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMG20AQ9NP66 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20AQ9NP66 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
HMG20AQ9NP66 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20AQ9NP66 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMG20AQ9NP66 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMG20AQ9NP66 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMG20AQ9NP66 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 ABHD17AP4-201ENST00000411545 909 ntBASIC20.87■□□□□ 0.93
HMG20AQ9NP66 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 LINC00526-201ENST00000581067 1875 ntBASIC20.87■□□□□ 0.93
HMG20AQ9NP66 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20AQ9NP66 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms