Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Snhg20-203ENSMUST00000182811 2153 ntBASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Tmc1Q8R4P5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Tmc1Q8R4P5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Tmc1Q8R4P5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Tmc1Q8R4P5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Tmc1Q8R4P5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tmc1Q8R4P5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tmc1Q8R4P5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tmc1Q8R4P5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tmc1Q8R4P5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.58■■□□□ 1.69
Tmc1Q8R4P5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tmc1Q8R4P5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tmc1Q8R4P5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Tmc1Q8R4P5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Tmc1Q8R4P5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tmc1Q8R4P5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tmc1Q8R4P5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tmc1Q8R4P5 Gm10420-201ENSMUST00000121713 882 ntBASIC25.57■■□□□ 1.68
Tmc1Q8R4P5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Tmc1Q8R4P5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tmc1Q8R4P5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Tmc1Q8R4P5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tmc1Q8R4P5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC25.56■■□□□ 1.68
Tmc1Q8R4P5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Tmc1Q8R4P5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Tmc1Q8R4P5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC25.56■■□□□ 1.68
Tmc1Q8R4P5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Tmc1Q8R4P5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Tmc1Q8R4P5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Tmc1Q8R4P5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Tmc1Q8R4P5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
Tmc1Q8R4P5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tmc1Q8R4P5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tmc1Q8R4P5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.55■■□□□ 1.68
Tmc1Q8R4P5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Tmc1Q8R4P5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tmc1Q8R4P5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Tmc1Q8R4P5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tmc1Q8R4P5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tmc1Q8R4P5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tmc1Q8R4P5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tmc1Q8R4P5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Tmc1Q8R4P5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Tmc1Q8R4P5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Tmc1Q8R4P5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Tmc1Q8R4P5 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.53■■□□□ 1.68
Tmc1Q8R4P5 Gm5913-201ENSMUST00000119397 1399 ntBASIC25.53■■□□□ 1.68
Tmc1Q8R4P5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Tmc1Q8R4P5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Tmc1Q8R4P5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Tmc1Q8R4P5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.51■■□□□ 1.67
Tmc1Q8R4P5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.51■■□□□ 1.67
Tmc1Q8R4P5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Tmc1Q8R4P5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Tmc1Q8R4P5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Tmc1Q8R4P5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Tmc1Q8R4P5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Tmc1Q8R4P5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Tmc1Q8R4P5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Tmc1Q8R4P5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Tmc1Q8R4P5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmc1Q8R4P5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Tmc1Q8R4P5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Tmc1Q8R4P5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Tmc1Q8R4P5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Tmc1Q8R4P5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Tmc1Q8R4P5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.48■■□□□ 1.67
Tmc1Q8R4P5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Tmc1Q8R4P5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Tmc1Q8R4P5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Tmc1Q8R4P5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
Tmc1Q8R4P5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Tmc1Q8R4P5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Tmc1Q8R4P5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms