Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cmc4Q61908 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cmc4Q61908 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cmc4Q61908 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.29■□□□□ 0.04
Cmc4Q61908 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cmc4Q61908 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cmc4Q61908 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cmc4Q61908 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cmc4Q61908 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cmc4Q61908 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.28■□□□□ 0.04
Cmc4Q61908 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.28■□□□□ 0.04
Cmc4Q61908 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.28■□□□□ 0.04
Cmc4Q61908 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cmc4Q61908 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cmc4Q61908 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cmc4Q61908 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cmc4Q61908 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.27■□□□□ 0.04
Cmc4Q61908 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cmc4Q61908 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cmc4Q61908 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.27■□□□□ 0.04
Cmc4Q61908 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.27■□□□□ 0.04
Cmc4Q61908 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cmc4Q61908 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cmc4Q61908 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cmc4Q61908 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cmc4Q61908 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cmc4Q61908 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cmc4Q61908 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.26■□□□□ 0.03
Cmc4Q61908 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cmc4Q61908 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cmc4Q61908 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.26■□□□□ 0.03
Cmc4Q61908 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cmc4Q61908 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cmc4Q61908 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cmc4Q61908 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cmc4Q61908 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cmc4Q61908 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cmc4Q61908 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cmc4Q61908 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cmc4Q61908 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cmc4Q61908 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cmc4Q61908 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cmc4Q61908 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.25■□□□□ 0.03
Cmc4Q61908 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cmc4Q61908 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.25■□□□□ 0.03
Cmc4Q61908 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.25■□□□□ 0.03
Cmc4Q61908 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cmc4Q61908 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cmc4Q61908 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cmc4Q61908 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cmc4Q61908 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cmc4Q61908 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cmc4Q61908 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cmc4Q61908 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cmc4Q61908 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cmc4Q61908 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cmc4Q61908 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.24■□□□□ 0.03
Cmc4Q61908 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.24■□□□□ 0.03
Cmc4Q61908 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Cmc4Q61908 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cmc4Q61908 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cmc4Q61908 Gm9959-201ENSMUST00000068277 390 ntBASIC15.24■□□□□ 0.03
Cmc4Q61908 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cmc4Q61908 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cmc4Q61908 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cmc4Q61908 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cmc4Q61908 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cmc4Q61908 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cmc4Q61908 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cmc4Q61908 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.23■□□□□ 0.03
Cmc4Q61908 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cmc4Q61908 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cmc4Q61908 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cmc4Q61908 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cmc4Q61908 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cmc4Q61908 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cmc4Q61908 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.22■□□□□ 0.03
Cmc4Q61908 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cmc4Q61908 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cmc4Q61908 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cmc4Q61908 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cmc4Q61908 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cmc4Q61908 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cmc4Q61908 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.21■□□□□ 0.03
Cmc4Q61908 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cmc4Q61908 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cmc4Q61908 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cmc4Q61908 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cmc4Q61908 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cmc4Q61908 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cmc4Q61908 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cmc4Q61908 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms