Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc1P07903 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc1P07903 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc1P07903 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc1P07903 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc1P07903 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc1P07903 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc1P07903 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.39■□□□□ 0.37
Ercc1P07903 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.39■□□□□ 0.37
Ercc1P07903 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ercc1P07903 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc1P07903 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc1P07903 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc1P07903 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc1P07903 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc1P07903 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc1P07903 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.38■□□□□ 0.37
Ercc1P07903 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc1P07903 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc1P07903 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc1P07903 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ercc1P07903 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ercc1P07903 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc1P07903 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.37■□□□□ 0.37
Ercc1P07903 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc1P07903 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc1P07903 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc1P07903 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ercc1P07903 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc1P07903 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc1P07903 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.36■□□□□ 0.37
Ercc1P07903 Gm45364-201ENSMUST00000210883 159 ntBASIC17.36■□□□□ 0.37
Ercc1P07903 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc1P07903 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc1P07903 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc1P07903 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc1P07903 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ercc1P07903 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc1P07903 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.35■□□□□ 0.37
Ercc1P07903 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ercc1P07903 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc1P07903 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc1P07903 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc1P07903 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ercc1P07903 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.35■□□□□ 0.37
Ercc1P07903 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc1P07903 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.34■□□□□ 0.37
Ercc1P07903 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ercc1P07903 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc1P07903 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc1P07903 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ercc1P07903 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.34■□□□□ 0.37
Ercc1P07903 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Ercc1P07903 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ercc1P07903 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ercc1P07903 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Ercc1P07903 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.33■□□□□ 0.36
Ercc1P07903 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Ercc1P07903 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Ercc1P07903 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Ercc1P07903 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ercc1P07903 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ercc1P07903 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.32■□□□□ 0.36
Ercc1P07903 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ercc1P07903 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ercc1P07903 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc1P07903 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.31■□□□□ 0.36
Ercc1P07903 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.31■□□□□ 0.36
Ercc1P07903 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ercc1P07903 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc1P07903 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc1P07903 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.3■□□□□ 0.36
Ercc1P07903 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc1P07903 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms