Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10226O88253 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gm10226O88253 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10226O88253 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10226O88253 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10226O88253 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm10226O88253 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm10226O88253 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm10226O88253 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm10226O88253 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm10226O88253 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm10226O88253 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm10226O88253 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm10226O88253 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.22■□□□□ 0.19
Gm10226O88253 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm10226O88253 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10226O88253 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10226O88253 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10226O88253 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10226O88253 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10226O88253 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10226O88253 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10226O88253 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.21■□□□□ 0.19
Gm10226O88253 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm10226O88253 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10226O88253 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm10226O88253 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm10226O88253 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm10226O88253 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm10226O88253 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm10226O88253 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm10226O88253 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm10226O88253 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Gm10226O88253 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm10226O88253 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm10226O88253 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm10226O88253 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm10226O88253 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Gm10226O88253 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gm10226O88253 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm10226O88253 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm10226O88253 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm10226O88253 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm10226O88253 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm10226O88253 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Gm10226O88253 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.18■□□□□ 0.18
Gm10226O88253 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.17■□□□□ 0.18
Gm10226O88253 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm10226O88253 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gm10226O88253 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm10226O88253 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.17■□□□□ 0.18
Gm10226O88253 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.17■□□□□ 0.18
Gm10226O88253 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm10226O88253 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Gm10226O88253 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.16■□□□□ 0.18
Gm10226O88253 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gm10226O88253 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.16■□□□□ 0.18
Gm10226O88253 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm10226O88253 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10226O88253 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10226O88253 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm10226O88253 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.15■□□□□ 0.18
Gm10226O88253 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10226O88253 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10226O88253 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10226O88253 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10226O88253 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.14■□□□□ 0.17
Gm10226O88253 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10226O88253 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10226O88253 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10226O88253 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10226O88253 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm10226O88253 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm10226O88253 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10226O88253 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10226O88253 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10226O88253 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm10226O88253 Gm12922-201ENSMUST00000120626 809 ntBASIC16.13■□□□□ 0.17
Gm10226O88253 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10226O88253 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10226O88253 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10226O88253 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm10226O88253 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10226O88253 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10226O88253 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm10226O88253 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm10226O88253 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm10226O88253 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.12■□□□□ 0.17
Gm10226O88253 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm10226O88253 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10226O88253 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 472.1 ms