Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pdlim1O70400 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim1O70400 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim1O70400 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.71■□□□□ 0.91
Pdlim1O70400 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim1O70400 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim1O70400 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim1O70400 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim1O70400 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
Pdlim1O70400 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim1O70400 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim1O70400 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim1O70400 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim1O70400 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim1O70400 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.69■□□□□ 0.9
Pdlim1O70400 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.69■□□□□ 0.9
Pdlim1O70400 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim1O70400 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim1O70400 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.69■□□□□ 0.9
Pdlim1O70400 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pdlim1O70400 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim1O70400 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pdlim1O70400 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.68■□□□□ 0.9
Pdlim1O70400 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim1O70400 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim1O70400 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim1O70400 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim1O70400 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pdlim1O70400 Gm45102-201ENSMUST00000207427 857 ntBASIC20.67■□□□□ 0.9
Pdlim1O70400 Gm9959-201ENSMUST00000068277 390 ntBASIC20.67■□□□□ 0.9
Pdlim1O70400 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim1O70400 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pdlim1O70400 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.67■□□□□ 0.9
Pdlim1O70400 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.66■□□□□ 0.9
Pdlim1O70400 Etf1-202ENSMUST00000180351 108 ntBASIC20.66■□□□□ 0.9
Pdlim1O70400 Gm7417-201ENSMUST00000192950 473 ntBASIC20.66■□□□□ 0.9
Pdlim1O70400 Rps24-207ENSMUST00000224568 714 ntBASIC20.66■□□□□ 0.9
Pdlim1O70400 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim1O70400 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim1O70400 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pdlim1O70400 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim1O70400 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.65■□□□□ 0.9
Pdlim1O70400 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.65■□□□□ 0.9
Pdlim1O70400 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pdlim1O70400 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim1O70400 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim1O70400 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim1O70400 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim1O70400 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim1O70400 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim1O70400 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.63■□□□□ 0.89
Pdlim1O70400 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim1O70400 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Pdlim1O70400 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pdlim1O70400 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim1O70400 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.62■□□□□ 0.89
Pdlim1O70400 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim1O70400 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim1O70400 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim1O70400 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pdlim1O70400 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim1O70400 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim1O70400 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim1O70400 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim1O70400 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.61■□□□□ 0.89
Pdlim1O70400 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim1O70400 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim1O70400 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim1O70400 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdlim1O70400 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.6■□□□□ 0.89
Pdlim1O70400 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pdlim1O70400 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Pdlim1O70400 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.6■□□□□ 0.89
Pdlim1O70400 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pdlim1O70400 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdlim1O70400 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdlim1O70400 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.6■□□□□ 0.89
Pdlim1O70400 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim1O70400 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim1O70400 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim1O70400 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim1O70400 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim1O70400 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.59■□□□□ 0.89
Pdlim1O70400 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim1O70400 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim1O70400 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim1O70400 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdlim1O70400 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pdlim1O70400 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.58■□□□□ 0.89
Pdlim1O70400 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pdlim1O70400 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdlim1O70400 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms