Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Lnp1A0A1B0GSK3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Gm43566-201ENSMUST00000196851 808 ntBASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lnp1A0A1B0GSK3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lnp1A0A1B0GSK3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lnp1A0A1B0GSK3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lnp1A0A1B0GSK3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lnp1A0A1B0GSK3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lnp1A0A1B0GSK3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.34■□□□□ 0.37
Lnp1A0A1B0GSK3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lnp1A0A1B0GSK3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Lnp1A0A1B0GSK3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lnp1A0A1B0GSK3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lnp1A0A1B0GSK3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Lnp1A0A1B0GSK3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lnp1A0A1B0GSK3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lnp1A0A1B0GSK3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.33■□□□□ 0.36
Lnp1A0A1B0GSK3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lnp1A0A1B0GSK3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lnp1A0A1B0GSK3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lnp1A0A1B0GSK3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Lnp1A0A1B0GSK3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lnp1A0A1B0GSK3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lnp1A0A1B0GSK3 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.32■□□□□ 0.36
Lnp1A0A1B0GSK3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lnp1A0A1B0GSK3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lnp1A0A1B0GSK3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lnp1A0A1B0GSK3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lnp1A0A1B0GSK3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lnp1A0A1B0GSK3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lnp1A0A1B0GSK3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lnp1A0A1B0GSK3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lnp1A0A1B0GSK3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.29■□□□□ 0.36
Lnp1A0A1B0GSK3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lnp1A0A1B0GSK3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms