Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-4A0A075B652 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav5-4A0A075B652 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-4A0A075B652 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-4A0A075B652 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-4A0A075B652 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-4A0A075B652 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-4A0A075B652 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav5-4A0A075B652 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-4A0A075B652 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav5-4A0A075B652 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-4A0A075B652 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-4A0A075B652 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav5-4A0A075B652 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-4A0A075B652 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-4A0A075B652 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav5-4A0A075B652 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-4A0A075B652 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-4A0A075B652 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-4A0A075B652 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-4A0A075B652 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-4A0A075B652 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav5-4A0A075B652 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav5-4A0A075B652 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav5-4A0A075B652 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Trav5-4A0A075B652 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav5-4A0A075B652 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav5-4A0A075B652 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav5-4A0A075B652 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav5-4A0A075B652 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav5-4A0A075B652 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav5-4A0A075B652 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-4A0A075B652 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Trav5-4A0A075B652 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-4A0A075B652 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-4A0A075B652 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trav5-4A0A075B652 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-4A0A075B652 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-4A0A075B652 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Trav5-4A0A075B652 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav5-4A0A075B652 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-4A0A075B652 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.32■□□□□ 0.36
Trav5-4A0A075B652 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-4A0A075B652 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-4A0A075B652 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-4A0A075B652 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-4A0A075B652 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-4A0A075B652 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav5-4A0A075B652 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav5-4A0A075B652 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav5-4A0A075B652 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-4A0A075B652 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.27■□□□□ 0.36
Trav5-4A0A075B652 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5-4A0A075B652 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.27■□□□□ 0.35
Trav5-4A0A075B652 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-4A0A075B652 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-4A0A075B652 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-4A0A075B652 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-4A0A075B652 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Cap2-205ENSMUST00000225824 1634 ntBASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.26■□□□□ 0.35
Trav5-4A0A075B652 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms