Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMC4Q9NTJ3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 AC068587.6-202ENST00000641839 5619 ntBASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 HMGN1P19-201ENST00000436976 333 ntBASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMC4Q9NTJ3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 AC236430.1-201ENST00000402231 743 ntBASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 AC093004.1-201ENST00000508850 424 ntBASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 LINC02560-201ENST00000596379 459 ntBASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMC4Q9NTJ3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 AC002472.2-201ENST00000442739 958 ntBASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 FAM207CP-201ENST00000443486 507 ntBASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 FAM86LP-201ENST00000478302 853 ntBASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 AC055876.2-201ENST00000531834 546 ntBASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.9■□□□□ 0.78
SMC4Q9NTJ3 MIR4745-201ENST00000577608 62 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms