Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AC015656.1-201ENST00000624209 3578 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 BX640514.1-201ENST00000583223 1918 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 FAM220BP-201ENST00000377689 816 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AC093909.1-201ENST00000504731 1122 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 IGHV3-22-201ENST00000520721 359 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AC112191.1-201ENST00000523689 701 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AC018845.2-201ENST00000568326 409 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AC008267.7-201ENST00000624570 1194 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AL607033.1-201ENST00000623900 1599 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 AC005840.4-201ENST00000541242 2494 ntBASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00242Q5T6M2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00242Q5T6M2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms