Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm10766-202ENSMUST00000194123 606 ntBASIC9.69□□□□□ -0.86
Ctdsp1P58466 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.69□□□□□ -0.86
Ctdsp1P58466 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm18669-201ENSMUST00000216049 778 ntBASIC9.69□□□□□ -0.86
Ctdsp1P58466 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.69□□□□□ -0.86
Ctdsp1P58466 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.69□□□□□ -0.86
Ctdsp1P58466 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ctdsp1P58466 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm5566-201ENSMUST00000116118 459 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm7862-201ENSMUST00000121461 292 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm8116-201ENSMUST00000182917 1201 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm10060-201ENSMUST00000212002 111 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Dupd1-202ENSMUST00000224735 548 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Gm15590-201ENSMUST00000078419 552 ntBASIC9.68□□□□□ -0.86
Ctdsp1P58466 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ctdsp1P58466 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms