Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATRXP46100 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATRXP46100 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.02□□□□□ -0.16
ATRXP46100 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.02□□□□□ -0.17
ATRXP46100 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ATRXP46100 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.02□□□□□ -0.17
ATRXP46100 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ATRXP46100 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.02□□□□□ -0.17
ATRXP46100 GHSR-202ENST00000427970 912 ntBASIC14.02□□□□□ -0.17
ATRXP46100 RNMTL1P1-201ENST00000454103 560 ntBASIC14.02□□□□□ -0.17
ATRXP46100 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.02□□□□□ -0.17
ATRXP46100 AL160314.3-201ENST00000556041 767 ntBASIC14.02□□□□□ -0.17
ATRXP46100 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.02□□□□□ -0.17
ATRXP46100 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.02□□□□□ -0.17
ATRXP46100 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.02□□□□□ -0.17
ATRXP46100 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
ATRXP46100 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.02□□□□□ -0.17
ATRXP46100 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.02□□□□□ -0.17
ATRXP46100 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A7P-201ENST00000382628 1395 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A23P-201ENST00000400136 1395 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A21P-201ENST00000510875 1396 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A15P-201ENST00000514465 1395 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A6P-201ENST00000515148 1394 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A16P-201ENST00000526662 1395 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A9P-201ENST00000527940 1395 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A5P-201ENST00000528738 1395 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A14P-201ENST00000530386 1395 ntBASIC14.02□□□□□ -0.17
ATRXP46100 FAM90A13P-201ENST00000534703 1395 ntBASIC14.02□□□□□ -0.17
ATRXP46100 AL592424.1-201ENST00000563624 1536 ntBASIC14.02□□□□□ -0.17
ATRXP46100 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ATRXP46100 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 PHKG1P2-201ENST00000457537 863 ntBASIC14.01□□□□□ -0.17
ATRXP46100 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.01□□□□□ -0.17
ATRXP46100 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.01□□□□□ -0.17
ATRXP46100 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.01□□□□□ -0.17
ATRXP46100 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
ATRXP46100 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 AL390961.4-201ENST00000623958 2535 ntBASIC14.01□□□□□ -0.17
ATRXP46100 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.01□□□□□ -0.17
ATRXP46100 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.01□□□□□ -0.17
ATRXP46100 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.01□□□□□ -0.17
ATRXP46100 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ATRXP46100 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC14.01□□□□□ -0.17
ATRXP46100 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.01□□□□□ -0.17
ATRXP46100 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.01□□□□□ -0.17
ATRXP46100 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.01□□□□□ -0.17
ATRXP46100 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.01□□□□□ -0.17
ATRXP46100 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.01□□□□□ -0.17
ATRXP46100 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.01□□□□□ -0.17
ATRXP46100 MIR4683-201ENST00000579659 81 ntBASIC14.01□□□□□ -0.17
ATRXP46100 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ATRXP46100 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ATRXP46100 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATRXP46100 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ATRXP46100 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATRXP46100 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14□□□□□ -0.17
ATRXP46100 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATRXP46100 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms