Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC137767.1-201ENST00000602918 1920 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 PAN3-AS1-201ENST00000563843 1351 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 OR11G2-201ENST00000357366 1038 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 FRG1CP-201ENST00000358464 769 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 Y_RNA.81-201ENST00000362997 102 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 PAGE1-201ENST00000376150 665 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 SPACA5-202ENST00000376940 571 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 SNORA75.4-201ENST00000391278 119 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 C11orf65-201ENST00000393084 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 LYPLA1P3-201ENST00000402650 695 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC009302.1-201ENST00000417147 390 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 ELOCP9-201ENST00000418624 239 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 SDCBPP3-201ENST00000419629 891 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC009237.2-201ENST00000421358 284 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 ROBO2P1-201ENST00000422054 288 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC009480.2-201ENST00000422916 432 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL392172.1-205ENST00000435378 768 ntTSL 5 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC004022.1-201ENST00000447766 1066 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL137024.1-201ENST00000451100 728 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL513542.1-201ENST00000452494 731 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL079303.1-201ENST00000486611 463 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC021678.1-201ENST00000505195 936 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 MTND2P33-201ENST00000506452 1031 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 FTH1P9-201ENST00000513251 355 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 MAST4-IT1-201ENST00000514241 658 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC093827.3-201ENST00000514631 1110 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC046195.2-201ENST00000519652 541 ntTSL 4 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC114321.1-201ENST00000520075 533 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC023632.3-201ENST00000521633 145 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 PTK2-241ENST00000522950 548 ntTSL 4 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 MED28P5-201ENST00000528254 438 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC069262.1-201ENST00000539058 672 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC008055.1-201ENST00000547032 609 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 FICD-205ENST00000552758 603 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC040169.1-201ENST00000565382 521 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AP002472.1-201ENST00000577490 586 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC015917.1-201ENST00000579654 510 ntBASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 SNX11-206ENST00000580219 1200 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC6.23□□□□□ -1.41
KRTAP4-9Q9BYQ8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms