Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AC025279.2-201ENST00000569730 653 ntBASIC16.45■□□□□ 0.22
VARS2Q5ST30 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AL162727.3-201ENST00000635661 2787 ntBASIC16.45■□□□□ 0.22
VARS2Q5ST30 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 AC084364.1-201ENST00000551967 1556 ntBASIC16.44■□□□□ 0.22
VARS2Q5ST30 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 RNA5SP412-201ENST00000516234 123 ntBASIC16.44■□□□□ 0.22
VARS2Q5ST30 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 RHOXF1P1-202ENST00000635473 501 ntBASIC16.44■□□□□ 0.22
VARS2Q5ST30 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VARS2Q5ST30 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VARS2Q5ST30 KRT8P35-201ENST00000483942 1338 ntBASIC16.44■□□□□ 0.22
VARS2Q5ST30 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 AC092127.1-201ENST00000567093 3455 ntBASIC16.43■□□□□ 0.22
VARS2Q5ST30 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 AC092506.1-202ENST00000401022 528 ntBASIC16.43■□□□□ 0.22
VARS2Q5ST30 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 FAM21FP-201ENST00000426241 1131 ntBASIC16.43■□□□□ 0.22
VARS2Q5ST30 AC026954.1-201ENST00000429771 1293 ntBASIC16.43■□□□□ 0.22
VARS2Q5ST30 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 RPL12P24-201ENST00000474907 486 ntBASIC16.43■□□□□ 0.22
VARS2Q5ST30 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms