Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6P35125 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6P35125 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6P35125 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
USP6P35125 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
USP6P35125 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6P35125 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 MARK2P5-201ENST00000507649 634 ntBASIC20.61■□□□□ 0.89
USP6P35125 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 FGFR3P5-201ENST00000564496 886 ntBASIC20.61■□□□□ 0.89
USP6P35125 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.61■□□□□ 0.89
USP6P35125 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.61■□□□□ 0.89
USP6P35125 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6P35125 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.61■□□□□ 0.89
USP6P35125 AC002472.3-201ENST00000640124 621 ntBASIC20.61■□□□□ 0.89
USP6P35125 AC068587.8-201ENST00000641239 219 ntBASIC20.61■□□□□ 0.89
USP6P35125 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
USP6P35125 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
USP6P35125 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.6■□□□□ 0.89
USP6P35125 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.6■□□□□ 0.89
USP6P35125 CICP11-201ENST00000434745 2827 ntBASIC20.6■□□□□ 0.89
USP6P35125 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
USP6P35125 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
USP6P35125 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 RN7SKP230-201ENST00000365642 335 ntBASIC20.6■□□□□ 0.89
USP6P35125 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 PTPA-217ENST00000434095 870 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.6■□□□□ 0.89
USP6P35125 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.6■□□□□ 0.89
USP6P35125 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.6■□□□□ 0.89
USP6P35125 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.6■□□□□ 0.89
USP6P35125 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.6■□□□□ 0.89
USP6P35125 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 AF254983.2-201ENST00000612331 135 ntBASIC20.6■□□□□ 0.89
USP6P35125 AC091544.8-201ENST00000619490 361 ntBASIC20.6■□□□□ 0.89
USP6P35125 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6P35125 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.6■□□□□ 0.89
USP6P35125 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
USP6P35125 AL139384.1-201ENST00000612143 3047 ntBASIC20.59■□□□□ 0.89
USP6P35125 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
USP6P35125 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.59■□□□□ 0.89
USP6P35125 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.59■□□□□ 0.89
USP6P35125 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.59■□□□□ 0.89
USP6P35125 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 LINC02199-201ENST00000506655 2702 ntBASIC20.59■□□□□ 0.89
USP6P35125 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 FXNP2-201ENST00000411625 547 ntBASIC20.59■□□□□ 0.89
USP6P35125 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
USP6P35125 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.59■□□□□ 0.89
USP6P35125 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6P35125 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC20.59■□□□□ 0.89
USP6P35125 CU633904.3-201ENST00000624042 1029 ntBASIC20.59■□□□□ 0.89
USP6P35125 AC004899.1-201ENST00000424687 1714 ntBASIC20.59■□□□□ 0.89
USP6P35125 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms