Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 AC004066.1-201ENST00000502488 802 ntBASIC15.72■□□□□ 0.11
PRAMEF11O60813 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 SAMD11P1-201ENST00000571429 661 ntBASIC15.72■□□□□ 0.11
PRAMEF11O60813 AL358472.5-202ENST00000641448 1267 ntBASIC15.72■□□□□ 0.11
PRAMEF11O60813 AC105233.6-201ENST00000642093 218 ntBASIC15.72■□□□□ 0.11
PRAMEF11O60813 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRAMEF11O60813 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.72■□□□□ 0.11
PRAMEF11O60813 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 AC104640.1-201ENST00000562617 2109 ntBASIC15.71■□□□□ 0.11
PRAMEF11O60813 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 AL162726.2-201ENST00000438986 1017 ntBASIC15.71■□□□□ 0.11
PRAMEF11O60813 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 ENPP7P5-201ENST00000541031 1031 ntBASIC15.71■□□□□ 0.11
PRAMEF11O60813 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEF11O60813 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEF11O60813 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms