Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRIM38O00635 MIR1909-201ENST00000411312 80 ntBASIC15.73■□□□□ 0.11
TRIM38O00635 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM38O00635 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM38O00635 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRIM38O00635 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRIM38O00635 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM38O00635 AC099568.2-201ENST00000609194 695 ntBASIC15.73■□□□□ 0.11
TRIM38O00635 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM38O00635 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 AC020658.6-201ENST00000623564 1870 ntBASIC15.72■□□□□ 0.11
TRIM38O00635 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM38O00635 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM38O00635 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM38O00635 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM38O00635 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TRIM38O00635 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM38O00635 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM38O00635 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM38O00635 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM38O00635 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM38O00635 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM38O00635 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM38O00635 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM38O00635 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM38O00635 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 AC005622.1-201ENST00000636801 1703 ntBASIC15.71■□□□□ 0.11
TRIM38O00635 TMBIM7P-203ENST00000641617 1718 ntBASIC15.71■□□□□ 0.11
TRIM38O00635 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM38O00635 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM38O00635 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM38O00635 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRIM38O00635 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM38O00635 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms