Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 MIR658-201ENST00000385210 100 ntBASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 AC012183.1-201ENST00000625197 499 ntBASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 REXO1L1P-202ENST00000608646 1974 ntBASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FNDC3AQ9Y2H6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC004987.2-201ENST00000395959 1148 ntBASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 RN7SL837P-201ENST00000463010 287 ntBASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC106886.1-201ENST00000568660 600 ntBASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 SRD5A3P1-201ENST00000603021 949 ntBASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 AL033527.5-202ENST00000641632 1098 ntBASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.99■□□□□ 0.15
FNDC3AQ9Y2H6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 AC097376.2-205ENST00000610159 5334 ntBASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms