Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 BCRP1-201ENST00000444246 691 ntBASIC13.69□□□□□ -0.22
TMEM54Q969K7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 GAPDHP40-201ENST00000505218 1006 ntBASIC13.69□□□□□ -0.22
TMEM54Q969K7 SERBP1P5-201ENST00000510079 1181 ntBASIC13.69□□□□□ -0.22
TMEM54Q969K7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 SPCS2P1-201ENST00000561636 679 ntBASIC13.69□□□□□ -0.22
TMEM54Q969K7 AC099568.2-201ENST00000609194 695 ntBASIC13.69□□□□□ -0.22
TMEM54Q969K7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TMEM54Q969K7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 FAM207CP-201ENST00000443486 507 ntBASIC13.68□□□□□ -0.22
TMEM54Q969K7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 AC055876.2-201ENST00000531834 546 ntBASIC13.68□□□□□ -0.22
TMEM54Q969K7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 AC011467.4-201ENST00000594891 528 ntBASIC13.68□□□□□ -0.22
TMEM54Q969K7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 SLC7A15P-201ENST00000424028 1363 ntBASIC13.68□□□□□ -0.22
TMEM54Q969K7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms