Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KIAA1549Q9HCM3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 AC073347.1-201ENST00000421633 2643 ntBASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 AC138035.3-201ENST00000622706 2791 ntBASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 AC092658.1-201ENST00000505836 891 ntBASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KIAA1549Q9HCM3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 LINC00528-201ENST00000600723 2160 ntBASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 AC026954.1-201ENST00000429771 1293 ntBASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 AL355994.2-201ENST00000447882 704 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms