Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 PPT1-215ENST00000641471 2368 ntBASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 AC006058.4-201ENST00000624016 1670 ntBASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 AC090616.6-203ENST00000579186 1945 ntBASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 FO393414.2-201ENST00000405153 598 ntBASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 MIR1233-2-201ENST00000408138 82 ntBASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 MIR1233-1-201ENST00000408722 82 ntBASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 AZGP1P1-201ENST00000411909 902 ntBASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC68Q9H2F9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 BANF1P1-201ENST00000553684 263 ntBASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC68Q9H2F9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms