Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm15806-201ENSMUST00000120696 955 ntBASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Gm24644-201ENSMUST00000157114 139 ntBASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Gm24526-201ENSMUST00000082921 158 ntBASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Gm27486-201ENSMUST00000184923 80 ntBASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Gm7063-201ENSMUST00000186840 981 ntBASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm1Q8VC85 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.02□□□□□ -0.48
Lsm1Q8VC85 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm1Q8VC85 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm1Q8VC85 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.02□□□□□ -0.48
Lsm1Q8VC85 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Lsm1Q8VC85 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm1Q8VC85 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm1Q8VC85 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm1Q8VC85 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms