Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 AC136759.1-202ENST00000530858 2194 ntBASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 MBP-201ENST00000354542 575 ntTSL 2 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 TSPY25P-201ENST00000429463 745 ntBASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 AL157407.1-201ENST00000435784 904 ntBASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 AC004837.1-201ENST00000446267 564 ntBASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 AC024293.1-201ENST00000467930 498 ntBASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 NEU3-207ENST00000534628 746 ntTSL 2 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 PLS3-210ENST00000626746 216 ntTSL 4 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC22.41■■□□□ 1.18
ARHGEF40Q8TER5 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 AC006158.1-201ENST00000610661 249 ntBASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 LINC01783-202ENST00000614408 828 ntBASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 BX284668.2-205ENST00000619677 828 ntBASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 CYP4F23P-201ENST00000593402 1579 ntBASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC22.4■■□□□ 1.18
ARHGEF40Q8TER5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF40Q8TER5 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 STK16-203ENST00000409516 895 ntTSL 2 BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 ACTBP7-201ENST00000418351 1124 ntBASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
ARHGEF40Q8TER5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 STK26-204ENST00000481105 1835 ntTSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 AL138725.1-201ENST00000407347 1314 ntBASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 AC018695.6-201ENST00000614011 534 ntBASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC22.38■■□□□ 1.17
ARHGEF40Q8TER5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms