Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HFM1A2PYH4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HFM1A2PYH4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HFM1A2PYH4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HFM1A2PYH4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HFM1A2PYH4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HFM1A2PYH4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HFM1A2PYH4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
HFM1A2PYH4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC22.72■■□□□ 1.23
HFM1A2PYH4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 AC022532.1-201ENST00000624563 1728 ntBASIC22.71■■□□□ 1.23
HFM1A2PYH4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 AC106820.3-201ENST00000561653 397 ntBASIC22.71■■□□□ 1.23
HFM1A2PYH4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
HFM1A2PYH4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC22.71■■□□□ 1.23
HFM1A2PYH4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.23
HFM1A2PYH4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
HFM1A2PYH4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
HFM1A2PYH4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 AL109954.1-202ENST00000564051 2148 ntBASIC22.7■■□□□ 1.22
HFM1A2PYH4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 AC026434.2-201ENST00000506094 1078 ntBASIC22.7■■□□□ 1.22
HFM1A2PYH4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC22.7■■□□□ 1.22
HFM1A2PYH4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HFM1A2PYH4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 AC013268.4-201ENST00000637413 2228 ntBASIC22.69■■□□□ 1.22
HFM1A2PYH4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms