Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.75□□□□□ -0.69
Smn1P97801 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.75□□□□□ -0.69
Smn1P97801 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Smn1P97801 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.75□□□□□ -0.69
Smn1P97801 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.75□□□□□ -0.69
Smn1P97801 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.75□□□□□ -0.69
Smn1P97801 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.75□□□□□ -0.69
Smn1P97801 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.75□□□□□ -0.69
Smn1P97801 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.75□□□□□ -0.69
Smn1P97801 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Smn1P97801 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.75□□□□□ -0.69
Smn1P97801 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.75□□□□□ -0.69
Smn1P97801 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Smn1P97801 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.75□□□□□ -0.69
Smn1P97801 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Smn1P97801 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smn1P97801 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Smn1P97801 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.74□□□□□ -0.69
Smn1P97801 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Smn1P97801 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.74□□□□□ -0.69
Smn1P97801 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.74□□□□□ -0.69
Smn1P97801 Gm15429-201ENSMUST00000151268 798 ntBASIC10.74□□□□□ -0.69
Smn1P97801 Gm6152-201ENSMUST00000151704 340 ntBASIC10.74□□□□□ -0.69
Smn1P97801 Gm16215-201ENSMUST00000161990 637 ntBASIC10.74□□□□□ -0.69
Smn1P97801 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Smn1P97801 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Smn1P97801 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.74□□□□□ -0.69
Smn1P97801 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.74□□□□□ -0.69
Smn1P97801 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.74□□□□□ -0.69
Smn1P97801 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Smn1P97801 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Smn1P97801 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smn1P97801 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Smn1P97801 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.73□□□□□ -0.69
Smn1P97801 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.73□□□□□ -0.69
Smn1P97801 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Smn1P97801 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.73□□□□□ -0.69
Smn1P97801 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 Gm14704-201ENSMUST00000120300 874 ntBASIC10.73□□□□□ -0.69
Smn1P97801 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smn1P97801 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.73□□□□□ -0.69
Smn1P97801 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms