Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
USP8P40818 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.13■□□□□ 0.33
USP8P40818 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.13■□□□□ 0.33
USP8P40818 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
USP8P40818 AC254562.1-201ENST00000417586 456 ntBASIC17.13■□□□□ 0.33
USP8P40818 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.13■□□□□ 0.33
USP8P40818 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 SPDYE14P-201ENST00000442619 822 ntBASIC17.13■□□□□ 0.33
USP8P40818 AC004967.1-201ENST00000453589 447 ntBASIC17.13■□□□□ 0.33
USP8P40818 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP8P40818 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.13■□□□□ 0.33
USP8P40818 AC105021.1-202ENST00000570572 669 ntBASIC17.13■□□□□ 0.33
USP8P40818 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.13■□□□□ 0.33
USP8P40818 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 AC009093.7-201ENST00000623853 1223 ntBASIC17.13■□□□□ 0.33
USP8P40818 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.13■□□□□ 0.33
USP8P40818 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.13■□□□□ 0.33
USP8P40818 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.13■□□□□ 0.33
USP8P40818 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 AC136621.1-201ENST00000624017 2304 ntBASIC17.13■□□□□ 0.33
USP8P40818 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
USP8P40818 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP8P40818 AC087386.2-201ENST00000623212 4637 ntBASIC17.13■□□□□ 0.33
USP8P40818 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
USP8P40818 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
USP8P40818 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.12■□□□□ 0.33
USP8P40818 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
USP8P40818 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.12■□□□□ 0.33
USP8P40818 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.12■□□□□ 0.33
USP8P40818 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
USP8P40818 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 MIR1233-2-201ENST00000408138 82 ntBASIC17.12■□□□□ 0.33
USP8P40818 MIR1233-1-201ENST00000408722 82 ntBASIC17.12■□□□□ 0.33
USP8P40818 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.12■□□□□ 0.33
USP8P40818 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.12■□□□□ 0.33
USP8P40818 MTND6P24-201ENST00000440466 518 ntBASIC17.12■□□□□ 0.33
USP8P40818 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.12■□□□□ 0.33
USP8P40818 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.12■□□□□ 0.33
USP8P40818 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.12■□□□□ 0.33
USP8P40818 MIR4453-201ENST00000584019 89 ntBASIC17.12■□□□□ 0.33
USP8P40818 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.12■□□□□ 0.33
USP8P40818 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.12■□□□□ 0.33
USP8P40818 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.12■□□□□ 0.33
USP8P40818 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.12■□□□□ 0.33
USP8P40818 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.12■□□□□ 0.33
USP8P40818 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
USP8P40818 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
USP8P40818 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.12■□□□□ 0.33
USP8P40818 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP8P40818 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
USP8P40818 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
USP8P40818 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.11■□□□□ 0.33
USP8P40818 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.11■□□□□ 0.33
USP8P40818 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
USP8P40818 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.11■□□□□ 0.33
USP8P40818 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP8P40818 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms