Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.39■□□□□ 0.37
COL11A1P12107 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.39■□□□□ 0.37
COL11A1P12107 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.39■□□□□ 0.37
COL11A1P12107 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.39■□□□□ 0.37
COL11A1P12107 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.39■□□□□ 0.37
COL11A1P12107 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.38■□□□□ 0.37
COL11A1P12107 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
COL11A1P12107 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
COL11A1P12107 AC112693.3-201ENST00000624819 1983 ntBASIC17.38■□□□□ 0.37
COL11A1P12107 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 SLC25A24P2-201ENST00000415059 510 ntBASIC17.38■□□□□ 0.37
COL11A1P12107 AC016700.1-201ENST00000429424 312 ntBASIC17.38■□□□□ 0.37
COL11A1P12107 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.38■□□□□ 0.37
COL11A1P12107 AC005077.2-201ENST00000449786 690 ntBASIC17.38■□□□□ 0.37
COL11A1P12107 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.38■□□□□ 0.37
COL11A1P12107 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.38■□□□□ 0.37
COL11A1P12107 AP001505.2-201ENST00000616815 443 ntBASIC17.38■□□□□ 0.37
COL11A1P12107 AC091544.8-201ENST00000619490 361 ntBASIC17.38■□□□□ 0.37
COL11A1P12107 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 AL365203.3-201ENST00000609742 2057 ntBASIC17.38■□□□□ 0.37
COL11A1P12107 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.38■□□□□ 0.37
COL11A1P12107 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.38■□□□□ 0.37
COL11A1P12107 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.38■□□□□ 0.37
COL11A1P12107 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.38■□□□□ 0.37
COL11A1P12107 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL11A1P12107 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.37■□□□□ 0.37
COL11A1P12107 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.37■□□□□ 0.37
COL11A1P12107 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.37■□□□□ 0.37
COL11A1P12107 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
COL11A1P12107 AC022748.3-201ENST00000621828 275 ntBASIC17.37■□□□□ 0.37
COL11A1P12107 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL11A1P12107 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.37■□□□□ 0.37
COL11A1P12107 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.37■□□□□ 0.37
COL11A1P12107 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 AC244157.2-201ENST00000616239 1006 ntBASIC17.37■□□□□ 0.37
COL11A1P12107 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.37■□□□□ 0.37
COL11A1P12107 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.37■□□□□ 0.37
COL11A1P12107 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL11A1P12107 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.37■□□□□ 0.37
COL11A1P12107 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL11A1P12107 AP000593.2-201ENST00000542775 1433 ntBASIC17.37■□□□□ 0.37
COL11A1P12107 AC009093.2-202ENST00000620513 2079 ntBASIC17.36■□□□□ 0.37
COL11A1P12107 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COL11A1P12107 PCDHA1-201ENST00000378133 2726 ntBASIC17.36■□□□□ 0.37
COL11A1P12107 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms