Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 AC158981.3-201ENSMUST00000226844 1024 ntBASIC10.38□□□□□ -0.75
Pax1P09084 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.38□□□□□ -0.75
Pax1P09084 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pax1P09084 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pax1P09084 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pax1P09084 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Pax1P09084 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pax1P09084 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pax1P09084 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pax1P09084 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.38□□□□□ -0.75
Pax1P09084 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Gm26831-201ENSMUST00000181458 1380 ntBASIC10.38□□□□□ -0.75
Pax1P09084 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.38□□□□□ -0.75
Pax1P09084 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pax1P09084 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.37□□□□□ -0.75
Pax1P09084 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.37□□□□□ -0.75
Pax1P09084 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Pax1P09084 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Gm11637-201ENSMUST00000120601 592 ntBASIC10.37□□□□□ -0.75
Pax1P09084 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Gm27390-201ENSMUST00000184516 176 ntBASIC10.37□□□□□ -0.75
Pax1P09084 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Gm37024-201ENSMUST00000192224 868 ntBASIC10.37□□□□□ -0.75
Pax1P09084 Gm9931-201ENSMUST00000193584 1185 ntBASIC10.37□□□□□ -0.75
Pax1P09084 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC10.37□□□□□ -0.75
Pax1P09084 Gm19078-201ENSMUST00000206311 727 ntBASIC10.37□□□□□ -0.75
Pax1P09084 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.37□□□□□ -0.75
Pax1P09084 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pax1P09084 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pax1P09084 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Pax1P09084 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Pax1P09084 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pax1P09084 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.37□□□□□ -0.75
Pax1P09084 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pax1P09084 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pax1P09084 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pax1P09084 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pax1P09084 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pax1P09084 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Pax1P09084 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pax1P09084 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pax1P09084 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pax1P09084 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms