Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 UGT1A2P-201ENST00000454886 866 ntBASIC13.75□□□□□ -0.21
TMEM54Q969K7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 RARRES2P5-201ENST00000564013 466 ntBASIC13.75□□□□□ -0.21
TMEM54Q969K7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TMEM54Q969K7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM54Q969K7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 GHSR-202ENST00000427970 912 ntBASIC13.74□□□□□ -0.21
TMEM54Q969K7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.74□□□□□ -0.21
TMEM54Q969K7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 AC006058.4-201ENST00000624016 1670 ntBASIC13.74□□□□□ -0.21
TMEM54Q969K7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM54Q969K7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM54Q969K7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TMEM54Q969K7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM54Q969K7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM54Q969K7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM54Q969K7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM54Q969K7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM54Q969K7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms