Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC4Q92889 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ERCC4Q92889 MIR346-201ENST00000362234 95 ntBASIC17.82■□□□□ 0.44
ERCC4Q92889 AC004987.2-201ENST00000395959 1148 ntBASIC17.82■□□□□ 0.44
ERCC4Q92889 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.82■□□□□ 0.44
ERCC4Q92889 AL591424.1-201ENST00000442569 1213 ntBASIC17.82■□□□□ 0.44
ERCC4Q92889 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.82■□□□□ 0.44
ERCC4Q92889 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC4Q92889 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ERCC4Q92889 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.82■□□□□ 0.44
ERCC4Q92889 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.82■□□□□ 0.44
ERCC4Q92889 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ERCC4Q92889 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ERCC4Q92889 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC4Q92889 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC4Q92889 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ERCC4Q92889 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ERCC4Q92889 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC4Q92889 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC4Q92889 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC4Q92889 AC097376.2-205ENST00000610159 5334 ntBASIC17.82■□□□□ 0.44
ERCC4Q92889 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC4Q92889 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC4Q92889 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC4Q92889 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.82■□□□□ 0.44
ERCC4Q92889 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ERCC4Q92889 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.82■□□□□ 0.44
ERCC4Q92889 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ERCC4Q92889 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
ERCC4Q92889 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.81■□□□□ 0.44
ERCC4Q92889 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.81■□□□□ 0.44
ERCC4Q92889 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.81■□□□□ 0.44
ERCC4Q92889 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 FAM220BP-201ENST00000377689 816 ntBASIC17.81■□□□□ 0.44
ERCC4Q92889 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.81■□□□□ 0.44
ERCC4Q92889 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.81■□□□□ 0.44
ERCC4Q92889 TIMM8BP1-201ENST00000452384 211 ntBASIC17.81■□□□□ 0.44
ERCC4Q92889 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.81■□□□□ 0.44
ERCC4Q92889 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 SLC25A39P2-201ENST00000537614 270 ntBASIC17.81■□□□□ 0.44
ERCC4Q92889 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.81■□□□□ 0.44
ERCC4Q92889 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.81■□□□□ 0.44
ERCC4Q92889 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.81■□□□□ 0.44
ERCC4Q92889 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.81■□□□□ 0.44
ERCC4Q92889 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.81■□□□□ 0.44
ERCC4Q92889 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ERCC4Q92889 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
ERCC4Q92889 LINC00552-201ENST00000625151 2579 ntBASIC17.81■□□□□ 0.44
ERCC4Q92889 KRT8P37-201ENST00000451609 1420 ntBASIC17.81■□□□□ 0.44
ERCC4Q92889 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.81■□□□□ 0.44
ERCC4Q92889 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ERCC4Q92889 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC4Q92889 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 AP3S2-216ENST00000617003 1561 ntBASIC17.8■□□□□ 0.44
ERCC4Q92889 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC4Q92889 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC4Q92889 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ERCC4Q92889 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC4Q92889 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC4Q92889 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.8■□□□□ 0.44
ERCC4Q92889 SPDYE11-202ENST00000450699 704 ntBASIC17.8■□□□□ 0.44
ERCC4Q92889 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC4Q92889 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC4Q92889 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC4Q92889 SPDYE9P-201ENST00000570642 692 ntBASIC17.8■□□□□ 0.44
ERCC4Q92889 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC4Q92889 AL450472.2-201ENST00000603663 1156 ntBASIC17.8■□□□□ 0.44
ERCC4Q92889 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
ERCC4Q92889 SPDYE10P-202ENST00000612005 668 ntBASIC17.8■□□□□ 0.44
ERCC4Q92889 SPDYE8P-202ENST00000612377 668 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms