Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 AC015922.1-201ENST00000421102 1152 ntBASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 ZNF890P-202ENST00000530367 1156 ntBASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 COX20P2-201ENST00000452636 358 ntBASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 UGT1A2P-201ENST00000454886 866 ntBASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 AC015910.1-201ENST00000579400 975 ntBASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH19Q8TAB3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDH19Q8TAB3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.14■□□□□ 0.18
PCDH19Q8TAB3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 TCAF2P1-201ENST00000291129 2421 ntBASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AC236430.1-201ENST00000402231 743 ntBASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 TOMM22P5-201ENST00000416399 439 ntBASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AC241585.1-201ENST00000433527 519 ntBASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH19Q8TAB3 AC009477.1-201ENST00000452936 217 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms