Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KCNQ3O43525 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
KCNQ3O43525 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.86■□□□□ 0.77
KCNQ3O43525 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 EIF3FP3-201ENST00000434851 1086 ntBASIC19.86■□□□□ 0.77
KCNQ3O43525 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.86■□□□□ 0.77
KCNQ3O43525 RNA5SP486-201ENST00000515961 83 ntBASIC19.86■□□□□ 0.77
KCNQ3O43525 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.86■□□□□ 0.77
KCNQ3O43525 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
KCNQ3O43525 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.86■□□□□ 0.77
KCNQ3O43525 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KCNQ3O43525 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
KCNQ3O43525 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNQ3O43525 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.85■□□□□ 0.77
KCNQ3O43525 KRT8P44-201ENST00000441609 1350 ntBASIC19.85■□□□□ 0.77
KCNQ3O43525 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.85■□□□□ 0.77
KCNQ3O43525 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNQ3O43525 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNQ3O43525 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.85■□□□□ 0.77
KCNQ3O43525 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNQ3O43525 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.85■□□□□ 0.77
KCNQ3O43525 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNQ3O43525 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.85■□□□□ 0.77
KCNQ3O43525 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.85■□□□□ 0.77
KCNQ3O43525 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNQ3O43525 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNQ3O43525 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNQ3O43525 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
KCNQ3O43525 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.84■□□□□ 0.77
KCNQ3O43525 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 AC105250.1-201ENST00000509378 2057 ntBASIC19.84■□□□□ 0.77
KCNQ3O43525 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.84■□□□□ 0.77
KCNQ3O43525 AL139094.1-201ENST00000405549 1188 ntBASIC19.84■□□□□ 0.77
KCNQ3O43525 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
KCNQ3O43525 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNQ3O43525 AC099548.2-209ENST00000480264 625 ntBASIC19.84■□□□□ 0.77
KCNQ3O43525 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNQ3O43525 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNQ3O43525 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNQ3O43525 AC244093.1-201ENST00000610837 814 ntBASIC19.84■□□□□ 0.77
KCNQ3O43525 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.84■□□□□ 0.77
KCNQ3O43525 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
KCNQ3O43525 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNQ3O43525 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.84■□□□□ 0.77
KCNQ3O43525 AC006453.4-201ENST00000636949 1252 ntBASIC19.84■□□□□ 0.77
KCNQ3O43525 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.84■□□□□ 0.77
KCNQ3O43525 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNQ3O43525 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
KCNQ3O43525 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNQ3O43525 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.84■□□□□ 0.77
KCNQ3O43525 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNQ3O43525 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNQ3O43525 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNQ3O43525 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNQ3O43525 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNQ3O43525 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
KCNQ3O43525 AHCYP2-201ENST00000430630 1300 ntBASIC19.83■□□□□ 0.77
KCNQ3O43525 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNQ3O43525 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNQ3O43525 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms