Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 CLUHP6-201ENST00000580789 941 ntBASIC18.78■□□□□ 0.6
RFX7Q2KHR2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 AC133539.2-201ENST00000604757 467 ntBASIC18.78■□□□□ 0.6
RFX7Q2KHR2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 PDIA3P1-201ENST00000471856 1510 ntBASIC18.78■□□□□ 0.6
RFX7Q2KHR2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 AP003680.1-201ENST00000598970 3660 ntBASIC18.77■□□□□ 0.6
RFX7Q2KHR2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.77■□□□□ 0.6
RFX7Q2KHR2 BNIP3P42-201ENST00000454982 569 ntBASIC18.77■□□□□ 0.6
RFX7Q2KHR2 AC068587.3-201ENST00000526613 355 ntBASIC18.77■□□□□ 0.6
RFX7Q2KHR2 BNIP3P29-201ENST00000598302 571 ntBASIC18.77■□□□□ 0.6
RFX7Q2KHR2 AC011447.5-201ENST00000616168 564 ntBASIC18.77■□□□□ 0.6
RFX7Q2KHR2 AC005252.2-201ENST00000624630 1141 ntBASIC18.77■□□□□ 0.6
RFX7Q2KHR2 AL139384.1-201ENST00000612143 3047 ntBASIC18.77■□□□□ 0.59
RFX7Q2KHR2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RFX7Q2KHR2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFX7Q2KHR2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RFX7Q2KHR2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFX7Q2KHR2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RFX7Q2KHR2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 SOCS2P1-201ENST00000417727 557 ntBASIC18.76■□□□□ 0.59
RFX7Q2KHR2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 AC006486.2-201ENST00000624246 2199 ntBASIC18.76■□□□□ 0.59
RFX7Q2KHR2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RFX7Q2KHR2 CICP6-201ENST00000457191 2729 ntBASIC18.76■□□□□ 0.59
RFX7Q2KHR2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 AC073347.1-201ENST00000421633 2643 ntBASIC18.75■□□□□ 0.59
RFX7Q2KHR2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms