Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col1a2Q01149 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.68■□□□□ 0.1
Col1a2Q01149 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.68■□□□□ 0.1
Col1a2Q01149 Gm18734-201ENSMUST00000172937 808 ntBASIC15.68■□□□□ 0.1
Col1a2Q01149 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Col1a2Q01149 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col1a2Q01149 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.68■□□□□ 0.1
Col1a2Q01149 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col1a2Q01149 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col1a2Q01149 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col1a2Q01149 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Col1a2Q01149 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col1a2Q01149 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Gm15711-201ENSMUST00000118889 535 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 Gm12266-201ENSMUST00000120311 962 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col1a2Q01149 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col1a2Q01149 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col1a2Q01149 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.67■□□□□ 0.1
Col1a2Q01149 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Col1a2Q01149 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col1a2Q01149 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.67■□□□□ 0.1
Col1a2Q01149 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Col1a2Q01149 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.66■□□□□ 0.1
Col1a2Q01149 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.66■□□□□ 0.1
Col1a2Q01149 Gm5455-201ENSMUST00000058710 715 ntBASIC15.66■□□□□ 0.1
Col1a2Q01149 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col1a2Q01149 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Col1a2Q01149 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.66■□□□□ 0.1
Col1a2Q01149 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Col1a2Q01149 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.66■□□□□ 0.1
Col1a2Q01149 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.66■□□□□ 0.1
Col1a2Q01149 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col1a2Q01149 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.65■□□□□ 0.1
Col1a2Q01149 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.65■□□□□ 0.1
Col1a2Q01149 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.65■□□□□ 0.1
Col1a2Q01149 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Col1a2Q01149 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.65■□□□□ 0.1
Col1a2Q01149 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.65■□□□□ 0.1
Col1a2Q01149 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.65■□□□□ 0.1
Col1a2Q01149 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.65■□□□□ 0.1
Col1a2Q01149 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.65■□□□□ 0.1
Col1a2Q01149 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col1a2Q01149 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms