Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.75□□□□□ -0.53
SgcdP82347 Gm21854-201ENSMUST00000179901 471 ntBASIC11.75□□□□□ -0.53
SgcdP82347 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.75□□□□□ -0.53
SgcdP82347 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 Gm5425-201ENSMUST00000214125 459 ntBASIC11.75□□□□□ -0.53
SgcdP82347 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
SgcdP82347 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.75□□□□□ -0.53
SgcdP82347 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.75□□□□□ -0.53
SgcdP82347 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcdP82347 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SgcdP82347 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SgcdP82347 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SgcdP82347 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SgcdP82347 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.74□□□□□ -0.53
SgcdP82347 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SgcdP82347 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SgcdP82347 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SgcdP82347 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.74□□□□□ -0.53
SgcdP82347 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SgcdP82347 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.74□□□□□ -0.53
SgcdP82347 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SgcdP82347 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SgcdP82347 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.74□□□□□ -0.53
SgcdP82347 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.74□□□□□ -0.53
SgcdP82347 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SgcdP82347 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcdP82347 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SgcdP82347 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.73□□□□□ -0.53
SgcdP82347 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcdP82347 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
SgcdP82347 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Gm15393-201ENSMUST00000120499 219 ntBASIC11.73□□□□□ -0.53
SgcdP82347 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.73□□□□□ -0.53
SgcdP82347 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcdP82347 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 180.5 ms