Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.64□□□□□ -0.55
Sftpa1P35242 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.64□□□□□ -0.55
Sftpa1P35242 Gm9540-201ENSMUST00000188230 478 ntBASIC11.64□□□□□ -0.55
Sftpa1P35242 Gm43058-201ENSMUST00000197645 625 ntBASIC11.64□□□□□ -0.55
Sftpa1P35242 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.64□□□□□ -0.55
Sftpa1P35242 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.64□□□□□ -0.55
Sftpa1P35242 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.64□□□□□ -0.55
Sftpa1P35242 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sftpa1P35242 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.64□□□□□ -0.55
Sftpa1P35242 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sftpa1P35242 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Gm13035-201ENSMUST00000117496 342 ntBASIC11.63□□□□□ -0.55
Sftpa1P35242 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Gm8194-201ENSMUST00000159783 859 ntBASIC11.63□□□□□ -0.55
Sftpa1P35242 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Gm37246-201ENSMUST00000192665 835 ntBASIC11.63□□□□□ -0.55
Sftpa1P35242 Gm42937-201ENSMUST00000197360 752 ntBASIC11.63□□□□□ -0.55
Sftpa1P35242 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.63□□□□□ -0.55
Sftpa1P35242 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.63□□□□□ -0.55
Sftpa1P35242 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.63□□□□□ -0.55
Sftpa1P35242 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sftpa1P35242 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sftpa1P35242 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.62□□□□□ -0.55
Sftpa1P35242 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.62□□□□□ -0.55
Sftpa1P35242 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm23251-201ENSMUST00000103773 110 ntBASIC11.62□□□□□ -0.55
Sftpa1P35242 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sftpa1P35242 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.62□□□□□ -0.55
Sftpa1P35242 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Mir6958-201ENSMUST00000184207 73 ntBASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.62□□□□□ -0.55
Sftpa1P35242 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sftpa1P35242 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Sftpa1P35242 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms