Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.21□□□□□ -0.77
P04940 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04940 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04940 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.21□□□□□ -0.77
P04940 Mir1982-201ENSMUST00000157368 74 ntBASIC10.21□□□□□ -0.77
P04940 Gm23119-201ENSMUST00000158610 140 ntBASIC10.21□□□□□ -0.77
P04940 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
P04940 Gm9022-201ENSMUST00000182482 992 ntBASIC10.21□□□□□ -0.77
P04940 Gm27390-201ENSMUST00000184516 176 ntBASIC10.21□□□□□ -0.77
P04940 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04940 Gm43433-201ENSMUST00000196573 481 ntBASIC10.21□□□□□ -0.77
P04940 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04940 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P04940 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.21□□□□□ -0.77
P04940 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P04940 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04940 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
P04940 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
P04940 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
P04940 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.21□□□□□ -0.78
P04940 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
P04940 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.21□□□□□ -0.78
P04940 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.21□□□□□ -0.78
P04940 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04940 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
P04940 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.2□□□□□ -0.78
P04940 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.2□□□□□ -0.78
P04940 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
P04940 Gm23931-201ENSMUST00000103842 109 ntBASIC10.2□□□□□ -0.78
P04940 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Gm11425-201ENSMUST00000119608 498 ntBASIC10.2□□□□□ -0.78
P04940 Gm13342-201ENSMUST00000121055 207 ntBASIC10.2□□□□□ -0.78
P04940 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.2□□□□□ -0.78
P04940 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.2□□□□□ -0.78
P04940 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.2□□□□□ -0.78
P04940 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Gm18304-201ENSMUST00000189162 546 ntBASIC10.2□□□□□ -0.78
P04940 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.2□□□□□ -0.78
P04940 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.2□□□□□ -0.78
P04940 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.2□□□□□ -0.78
P04940 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.2□□□□□ -0.78
P04940 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.2□□□□□ -0.78
P04940 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Gm9396-201ENSMUST00000076703 567 ntBASIC10.2□□□□□ -0.78
P04940 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.2□□□□□ -0.78
P04940 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.2□□□□□ -0.78
P04940 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.2□□□□□ -0.78
P04940 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
P04940 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04940 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04940 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
P04940 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.19□□□□□ -0.78
P04940 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.19□□□□□ -0.78
P04940 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04940 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04940 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
P04940 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
P04940 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms