Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
ZIC3O60481 AC005034.1-201ENST00000426657 489 ntBASIC14.05□□□□□ -0.16
ZIC3O60481 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC3O60481 RN7SL837P-201ENST00000463010 287 ntBASIC14.05□□□□□ -0.16
ZIC3O60481 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.05□□□□□ -0.16
ZIC3O60481 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 AC120045.2-201ENST00000567334 178 ntBASIC14.05□□□□□ -0.16
ZIC3O60481 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC3O60481 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC3O60481 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.05□□□□□ -0.16
ZIC3O60481 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 AL035252.4-201ENST00000624174 288 ntBASIC14.05□□□□□ -0.16
ZIC3O60481 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 KRT8P22-201ENST00000562317 1415 ntBASIC14.05□□□□□ -0.16
ZIC3O60481 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.05□□□□□ -0.16
ZIC3O60481 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.05□□□□□ -0.16
ZIC3O60481 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZIC3O60481 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
ZIC3O60481 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.04□□□□□ -0.16
ZIC3O60481 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC3O60481 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZIC3O60481 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZIC3O60481 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZIC3O60481 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZIC3O60481 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC3O60481 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC3O60481 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.04□□□□□ -0.16
ZIC3O60481 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ZIC3O60481 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZIC3O60481 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
ZIC3O60481 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
ZIC3O60481 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.04□□□□□ -0.16
ZIC3O60481 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.04□□□□□ -0.16
ZIC3O60481 AC132938.2-201ENST00000579188 680 ntBASIC14.04□□□□□ -0.16
ZIC3O60481 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.04□□□□□ -0.16
ZIC3O60481 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ZIC3O60481 AL591163.1-201ENST00000641757 987 ntBASIC14.04□□□□□ -0.16
ZIC3O60481 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
ZIC3O60481 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.04□□□□□ -0.16
ZIC3O60481 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZIC3O60481 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.03□□□□□ -0.16
ZIC3O60481 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC3O60481 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms