Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 AL008718.2-201ENST00000609206 1313 ntBASIC23.09■■□□□ 1.29
CDC42BPBQ9Y5S2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 ISCA2P1-201ENST00000425548 448 ntBASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 AC006480.2-201ENST00000609770 1337 ntBASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPBQ9Y5S2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC23.08■■□□□ 1.28
CDC42BPBQ9Y5S2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.08■■□□□ 1.28
CDC42BPBQ9Y5S2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
CDC42BPBQ9Y5S2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPBQ9Y5S2 AL353637.1-201ENST00000451571 732 ntBASIC23.08■■□□□ 1.28
CDC42BPBQ9Y5S2 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPBQ9Y5S2 RCC2P8-201ENST00000502779 1035 ntBASIC23.08■■□□□ 1.28
CDC42BPBQ9Y5S2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPBQ9Y5S2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 FKBP4P6-201ENST00000457486 1332 ntBASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 AC073150.1-201ENST00000450406 1084 ntBASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 MEG3_2.1-201ENST00000611456 105 ntBASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPBQ9Y5S2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 TNRC18P3-201ENST00000441896 2691 ntBASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 AC099398.1-201ENST00000567919 2776 ntBASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 AC021723.1-201ENST00000486306 515 ntBASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 E2F3P2-201ENST00000447755 1422 ntBASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 AL662844.4-201ENST00000606367 2838 ntBASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPBQ9Y5S2 SLC9A7P1-202ENST00000556476 2239 ntBASIC23.05■■□□□ 1.28
CDC42BPBQ9Y5S2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPBQ9Y5S2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPBQ9Y5S2 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPBQ9Y5S2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPBQ9Y5S2 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms