Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 TPM3P8-201ENST00000330554 643 ntBASIC17.04■□□□□ 0.32
HIPK3Q9H422 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 POM121L10P-201ENST00000436994 1285 ntBASIC17.04■□□□□ 0.32
HIPK3Q9H422 CNN2P10-201ENST00000443067 918 ntBASIC17.04■□□□□ 0.32
HIPK3Q9H422 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 AL451050.2-201ENST00000606967 682 ntBASIC17.04■□□□□ 0.32
HIPK3Q9H422 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 ALOX12P2-203ENST00000570921 1945 ntBASIC17.04■□□□□ 0.32
HIPK3Q9H422 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 RNU1-114P-201ENST00000365297 166 ntBASIC17.03■□□□□ 0.32
HIPK3Q9H422 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 KLF2P2-201ENST00000416807 1039 ntBASIC17.03■□□□□ 0.32
HIPK3Q9H422 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 AC126915.1-201ENST00000522847 1038 ntBASIC17.03■□□□□ 0.32
HIPK3Q9H422 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 RN7SL48P-201ENST00000579283 293 ntBASIC17.03■□□□□ 0.32
HIPK3Q9H422 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 NDUFV2P1-201ENST00000596415 907 ntBASIC17.03■□□□□ 0.32
HIPK3Q9H422 AC138627.1-207ENST00000641560 1006 ntBASIC17.03■□□□□ 0.32
HIPK3Q9H422 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HIPK3Q9H422 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIPK3Q9H422 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.02■□□□□ 0.32
HIPK3Q9H422 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 HSPB1P2-201ENST00000448722 546 ntBASIC17.02■□□□□ 0.32
HIPK3Q9H422 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 MIR3619-201ENST00000579667 83 ntBASIC17.02■□□□□ 0.32
HIPK3Q9H422 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIPK3Q9H422 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HIPK3Q9H422 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms