Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Gm5781-201ENSMUST00000219792 443 ntBASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.16□□□□□ -0.62
Rtn4rQ99PI8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Gm14921-201ENSMUST00000118643 908 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Gm13786-201ENSMUST00000122371 333 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Gm27516-201ENSMUST00000184237 98 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Gm45331-201ENSMUST00000209868 554 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Daam2-202ENSMUST00000224595 1926 ntBASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rtn4rQ99PI8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.63
Rtn4rQ99PI8 Paupar-201ENSMUST00000194826 3482 ntBASIC11.15□□□□□ -0.63
Rtn4rQ99PI8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rtn4rQ99PI8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Gm6023-201ENSMUST00000118217 606 ntBASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Rtn4rQ99PI8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms