Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.81□□□□□ -0.36
Cnga4Q3UW12 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Gm14350-201ENSMUST00000116642 640 ntBASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Gm8227-201ENSMUST00000223306 571 ntBASIC12.8□□□□□ -0.36
Cnga4Q3UW12 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.8□□□□□ -0.36
Cnga4Q3UW12 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Gm9797-201ENSMUST00000052902 613 ntBASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.8□□□□□ -0.36
Cnga4Q3UW12 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Gm20445-201ENSMUST00000061905 565 ntBASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cnga4Q3UW12 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Cog3-203ENSMUST00000227473 4197 ntBASIC12.78□□□□□ -0.36
Cnga4Q3UW12 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms