Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MT-ND1P03886 AL662844.1-201ENST00000546340 181 ntBASIC14.9□□□□□ -0.02
MT-ND1P03886 KRT126P-201ENST00000549467 1181 ntBASIC14.9□□□□□ -0.02
MT-ND1P03886 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.9□□□□□ -0.02
MT-ND1P03886 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.9□□□□□ -0.02
MT-ND1P03886 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.9□□□□□ -0.02
MT-ND1P03886 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.9□□□□□ -0.02
MT-ND1P03886 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.9□□□□□ -0.02
MT-ND1P03886 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 SBF1P1-201ENST00000444527 5631 ntBASIC14.89□□□□□ -0.03
MT-ND1P03886 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 AC126365.1-201ENST00000578585 1514 ntBASIC14.89□□□□□ -0.03
MT-ND1P03886 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 RHOQP3-201ENST00000437982 621 ntBASIC14.89□□□□□ -0.03
MT-ND1P03886 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.89□□□□□ -0.03
MT-ND1P03886 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.89□□□□□ -0.03
MT-ND1P03886 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.89□□□□□ -0.03
MT-ND1P03886 AC109635.5-201ENST00000533593 962 ntBASIC14.89□□□□□ -0.03
MT-ND1P03886 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 AC010507.1-201ENST00000633895 436 ntBASIC14.89□□□□□ -0.03
MT-ND1P03886 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MT-ND1P03886 OR2I1P-209ENST00000641730 5365 ntBASIC14.89□□□□□ -0.03
MT-ND1P03886 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MT-ND1P03886 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MT-ND1P03886 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
MT-ND1P03886 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.88□□□□□ -0.03
MT-ND1P03886 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
MT-ND1P03886 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
MT-ND1P03886 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.88□□□□□ -0.03
MT-ND1P03886 GPX1P2-201ENST00000429271 606 ntBASIC14.88□□□□□ -0.03
MT-ND1P03886 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.88□□□□□ -0.03
MT-ND1P03886 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.88□□□□□ -0.03
MT-ND1P03886 KRT18P34-201ENST00000488218 1270 ntBASIC14.88□□□□□ -0.03
MT-ND1P03886 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.88□□□□□ -0.03
MT-ND1P03886 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.88□□□□□ -0.03
MT-ND1P03886 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.88□□□□□ -0.03
MT-ND1P03886 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.88□□□□□ -0.03
MT-ND1P03886 MIR4313-201ENST00000580760 101 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms